Centre Publications 2015

Akimoto S, Shinoda T, Chen M, Allakhverdiev SI, Tomo T (2015) Energy transfer in the chlorophyll f-containing cyanobacterium, Halomicronema hongdechloris, analyzed by time-resolved fluorescence spectroscopies. Photosynthesis research: 1-8

Alam MM, Hammer GL, van Oosterom EJ, Cruickshank AW, Hunt CH, Jordan DR (2014) A physiological framework to explain genetic and environmental regulation of tillering in sorghum. New Phytologist 203: 155-167

Atkin OK, Bloomfield KJ, Reich PB, Tjoelker MG, Asner GP, Bonal D, Bönisch G, Bradford MG, Cernusak LA, Cosio EG, Creek D, Crous KY, Domingues TF, Dukes JS, Egerton JJG, Evans JR, Farquhar GD, Fyllas NM, Gauthier PPG, Gloor E, Gimeno TE, Griffin KL, Guerrieri R, Heskel MA, Huntingford C, Ishida FY, Kattge J, Lambers H, Liddell MJ, Lloyd J, Lusk CH, Martin RE, Maksimov AP, Maximov TC, Malhi Y, Medlyn BE, Meir P, Mercado LM, Mirotchnick N, Ng D, Niinemets Ü, O’Sullivan OS, Phillips OL, Poorter L, Poot P, Prentice IC, Salinas N, Rowland LM, Ryan MG, Sitch S, Slot M, Smith NG, Turnbull MH, VanderWel MC, Valladares F, Veneklaas EJ, Weerasinghe LK, Wirth C, Wright IJ, Wythers KR, Xiang J, Xiang S, Zaragoza-Castells J (2015) Global variability in leaf respiration in relation to climate, plant functional types and leaf traits. New Phytologist 206: 614-636

Borrell AK, Mullet JE, George-Jaeggli B, van Oosterom EJ, Hammer GL, Klein PE, Jordan DR (2014) Drought adaptation of staygreen sorghum is associated with canopy development, leaf anatomy, root growth, and water uptake. Journal of experimental botany: eru232

Borrell AK, Oosterom EJ, Mullet JE, GeorgeJaeggli B, Jordan DR, Klein PE, Hammer GL (2014) Stay-green alleles individually enhance grain yield in sorghum under drought by modifying canopy development and water uptake patterns. New Phytologist 203: 817-830

Caemmerer S, Evans JR (2015) Temperature responses of mesophyll conductance differ greatly between species. Plant, cell & environment 38: 629-637

Carroll AJ, Zhang P, Whitehead L, Kaines S, Tcherkez G, Badger MR (2015) PhenoMeter: a metabolome database search tool using statistical similarity matching of metabolic phenotypes for high-confidence detection of functional links. Frontiers in bioengineering and biotechnology 3

Chenu K (2015) Chapter 13 – Characterizing the crop environment – nature, significance and applications. In VOSF Calderini, ed, Crop Physiology (Second Edition). Academic Press, San Diego, pp 321-348

Drake JE, Aspinwall MJ, Pfautsch S, Rymer PD, Reich PB, Smith RA, Crous KY, Tissue DT, Ghannoum O, Tjoelker MG (2015) The capacity to cope with climate warming declines from temperate to tropical latitudes in two widely distributed Eucalyptus species. Global change biology 21: 459-472

Furbank RT, Quick WP, Sirault XR (2015) Improving photosynthesis and yield potential in cereal crops by targeted genetic manipulation: Prospects, progress and challenges. Field Crops Research 182: 19-29 Ho QT, Berghuijs HNC, Watté R, Verboven P, Herremans E, Yin X, Retta MA, Aernouts B, Saeys W, Helfen L, Farquhar GD (2015) 3-D microscale modeling of CO2 transport and light propagation in tomato leaves enlightens photosynthesis. Plant, Cell & Environment

Hammer G, Messina C, van Oosterom E, Chapman S, Singh V, Borrell A, Jordan D, Cooper M (2016) Molecular Breeding for Complex Adaptive Traits: How Integrating Crop Ecophysiology and Modelling Can Enhance Efficiency. In Crop Systems Biology. Springer, pp 147-162

Kou J, Takahashi S, Fan D-Y, Badger MR, Chow WS (2015) Partially dissecting the steady-state electron fluxes in Photosystem I in wild-type and pgr5 and ndh mutants of Arabidopsis. Frontiers in plant science 6 Li Y, Chen M (2015) Novel chlorophylls and new directions in photosynthesis research. Functional Plant Biology 42: 493-501

Li Y, Lin Y, Garvey CJ, Birch D, Corkery RW, Loughlin PC, Scheer H, Willows RD, Chen M (2016) Characterization of red-shifted phycobilisomes isolated from the chlorophyll f-containing cyanobacterium Halomicronema hongdechloris. Biochimica et Biophysica Acta (BBA)-Bioenergetics 1857: 107-114

Lobell DB, Hammer GL, Chenu K, Zheng B, McLean G, Chapman SC (2015) The shifting influence of drought and heat stress for crops in northeast Australia. Global change biology 21: 4115-4127

Loughlin PC, Willows RD, Chen M (2015) Hydroxylation of the C 132 and C 18 carbons of chlorophylls by heme and molecular oxygen. Journal of Porphyrins and Phthalocyanines 19: 1007-1013

Martre P, Quilot-Turion B, Luquet D, OuldSidi M-M, Memmah , Chenu K, Debaeke P (2015) Model-assisted phenotyping and ideotype design. In VO Sadras, D Calderini, eds, Crop Physiology: Applications for Genetic Improvement and Agronomy. Elsevier, London

Nagel KA, Bonnett D, Furbank R, Walter A, Schurr U, Watt M (2015) Simultaneous effects of leaf irradiance and soil moisture on growth and root system architecture of novel wheat genotypes: implications for phenotyping. Journal of experimental botany: erv290

Ort DR, Merchant SS, Alric J, Barkan A, Blankenship RE, Bock R, Croce R, Hanson MR, Hibberd JM, Long SP, Moore TA, Moroney J, Niyogi KK, Parry MAJ, Peralta-Yahya PP, Prince RC, Redding KE, Spalding MH, van Wijk KJ, Vermaas WFJ, von Caemmerer S, Weber APM, Yeates TO, Yuan JS, Zhu XG (2015) Redesigning photosynthesis to sustainably meet global food and bioenergy demand. Proceedings of the National Academy of Sciences 112: 8529-8536

Palmer WM, Martin AP, Flynn JR, Reed SL, White RG, Furbank RT, Grof CP (2015) PEACLARITY: 3D molecular imaging of whole plant organs. Scientific reports 5 Pinto H, Powell JR, Sharwood RE, Tissue DT, Ghannoum O (2015) Variations in nitrogen use efficiency reflect the biochemical subtype while variations in water use efficiency reflect the evolutionary lineage of C4 grasses at interglacial CO2. Plant, cell & environment Richard CA, Hickey LT, Fletcher S, Jennings R, Chenu K, Christopher JT (2015) Highthroughput phenotyping of seminal root traits in wheat. Plant methods 11: 13

Rizal G, Thakur V, Dionora J, Karki S, Wanchana S, Acebron K, Larazo N, Garcia R, Mabilangan A, Montecillo F, Danila F, Mogul R, Pablico P, Leung H, Langdale JA, Sheehy J, Kelly S, Quick WP (2015) Two forward genetic screens for vein density mutants in sorghum converge on a cytochrome P450 gene in the brassinosteroid pathway. The Plant Journal 84: 257-266

Salehi A, Jimenez-Berni J, Deery DM, Palmer D, Holland E, Rozas-Larraondo P, Chapman SC, Georgakopoulos D, Furbank RT (2015) SensorDB: a virtual laboratory for the integration, visualization and analysis of varied biological sensor data. Plant methods 11: 1

Schortemeyer M, Evans JR, Bruhn D, Bergstrom DM, Ball MC (2015) Temperature responses of photosynthesis and respiration in a sub-Antarctic megaherb from Heard Island. Functional Plant Biology 42: 552-564

Silva-Pérez V, Evans JR, Molero G, Condon T, Furbank R, Reynolds M (2015) New temperature response parameters for wheat Rubisco. TRIGO (Wheat) Yield Potential: 50

Simko I, Jimenez-Berni JA, Furbank RT (2015) Detection of decay in fresh-cut lettuce using hyperspectral imaging and chlorophyll fluorescence imaging. Postharvest Biology and Technology 106: 44-52

Sirault X, Condon A, Wood J, Farquhar G, Rebetzke G (2015) “Rolledupness”: phenotyping leaf rolling in cereals using computer vision and functional data analysis approaches. Plant methods 11: 1

Whitney SM, Birch R, Kelso C, Beck JL, Kapralov MV (2015) Improving recombinant Rubisco biogenesis, plant photosynthesis and growth by coexpressing its ancillary RAF1 chaperone. Proceedings of the National Academy of Sciences 112: 3564-3569 Wi

lson R, Whitney S (2015) Photosynthesis: Getting it together for CO2 fixation. Nature Plants 1 Zheng B, Chapman SC, Christopher JT, Frederiks TM, Chenu K (2015) Frost trends and their estimated impact on yield in the Australian wheatbelt. Journal of experimental botany: erv163